|
KMID : 0364820200560040422
|
|
Korean Journal of Microbiology
2020 Volume.56 No. 4 p.422 ~ p.425
|
|
|
Draft genome sequence of the polysaccharide degrading bacterium Cytophagaceae strain SJW1-29
|
|
Baek Ki-Woon
Choi Ah-Young
|
|
|
Abstract
|
|
|
|
Draft genome sequencing of the Cytophagaceae strain SJW1-29, isolated from the Seomjin River in Korea, was performed using the PacBio platform. The draft genome was composed of 7,065,248 bp with a G + C content of 50.7%. Genome annotation revealed that the genome comprised 5,684 protein-coding genes, 9 rRNA genes, 41 tRNA genes, 2 ncRNA genes, and 273 pseudo genes. Genome analysis revealed that the strain SJW1-29 harbors several carbohydrate active enzymes, which are provides insights for understanding the polysaccharide degradation system of the strain at the genome level.
|
|
|
KEYWORD
|
|
|
Cytophagaceae, draft genome sequence, PacBio
|
|
|
FullTexts / Linksout information
|
|
|
|
|
|
Listed journal information
|
|
|